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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 08:13:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

PV_GBa0095I10.f PV_GBa Phaseolus vulgaris genomic clone PV_GBa0095I10 5', genomic survey sequence.
EI482539.1:175-194
CAACATACTGTGCTGTGCAGTAAGCAATAG175CCTGAACAGTGACCATTGGATTCACACCCAAAGCTGTGGGAAAGACACTT
VUH2-63G20TV VUUBBa (VUH2) Vigna unguiculata genomic clone VUH2-63G20, genomic survey sequence.
EI925073.1:200-219
CAACAGCCTGTGCTGTGCAATAAGCAATAG200CCTGAACAGTGACCATTGGATTCACACCCAAAGCTGTGGGAAAGACACTA
Medicago truncatula chromosome 8 clone mth2-41c1, complete sequence.
AC174363.7:112214-112233
GAACATGTTGTGCTGTGCAATATGCAATAG112214CCTGAACAGTGACCATTGGATTCACACCTAAAGCTGTGGGAAATACGCTT
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:43122178-43122197
CAACAGACTGAGCTGTGCAATAAGCGATAG43122178CCTGAACAGTGACCATTGGATTGACACCTAAAGCTGTGGGAAAGACACTA
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:1249347-1249366
GAATGGATTGGGAAGTGCAGTAAGCAATAG1249347CCTGAACAGTGACCATTGGATTTACCCCTAAAGCCGTTGGGAAGACACTT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:22032778-22032797
GAACATGTTGTGCGGTGCAGTAAGCAATAG22032778CCTGAACAGTGACCATTGGATTCACACCCAAAGCTGTAGGAAAGACACTC
Quercus robur genome assembly, chromosome: 12.
OW028776.1:40446011-40446030
GAGCTGATTGAGCAGTGCAATAAGCAATAG40446011CCTGAACAGTGACCATTGGATTAACACCTAAAGCTGTTGGAAACACACTT
Quercus robur genome assembly, chromosome: 12.
OW028776.1:40456501-40456520
GAGCTGATTGAGCAGTGCAATAAGCAATAG40456501CCTGAACAGTGACCATTGGATTAACACCTAAAGCTGTTGGAAACACACTT
Vicia faba genome assembly, chromosome: 5.
OX451740.1:502865572-502865591
CAACATGTTGTGCTGTGCAATATGCAATAG502865572CCTGAACAGTGACCATTGGATTCACACCCAAAGCTGTGGGAAACACACTT
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:22169025-22169044
GAACATGTTGTGCTGTGCAATATGCAATAG22169025CCTGAACAGTGACCATTGGATTCACACCTAAAGCTGTGGGAAATACACTT
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:86246418-86246437
CAACAGATTGTGCTGTGCAGTAAGCAATAG86246418CCTGAACAGTGACCATTGGATTCACCCCCAAAGCTGTGGGAAAGACACTT
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:534481976-534481995
GAACATGTTGTGCTGTACAATATGCAATAG534481976CCTGAACAGTGACCATTGGATTCACACCCAAAGCTGTGGGAAACACACTT
Diabrotica balteata genome assembly, chromosome: 6.
OU898281.1:26308734-26308753
CCTCTCGATAAACTGAATCTCTCGTTCTGG26308734CCTGAACAGTGACCATTGGAATATAAGTAGAAAAATATAACTTTCAATAT
Sequence 74901 from patent US 9029636.
HK983964.1:2595-2614
AAGTGTGTTTCCCACAGCTTTGGGTGTGAA2595TCCAATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTC
Sequence 2903 from patent US 10750711.
MV608014.1:2400-2419
AAGTGTGTTTCCCACAGCTTTGGGTGTGAA2400TCCAATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTC
Sequence 2903 from patent US 11819027.
OT846050.1:2400-2419
AAGTGTGTTTCCCACAGCTTTGGGTGTGAA2400TCCAATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTC
TT-28_A05 Samsun trichome library Nicotiana tabacum cDNA, mRNA sequence.
FG637306.1:575-594
AAGTGTTTTTCCAACTGCACTTGGTGTAAA575TCCAATGGTCACTGTTCAGGCCATTTCTTATTTCACTGCACAAAATGTGC
Petunia axillaris subsp. axillaris EST, clone dr004P0007C24_F.ab1 2007-08-10.
FN009089.1:548-567
AAGTGTGTTTCCAACGGCGCTTGGTGTGAA548TCCAATGGTCACTGTTCAGGCTATTTCTTATTGCACTGCACAAAATATAC
Ophiorrhiza pumila mRNA, clone: OPN029_B05, 3'end sequence, expressed in hairy root.
HX731241.1:272-291
AAGTGTTTTTCCAACAGCATTAGGAGTGAA272TCCAATGGTCACTGTTCAGGCCATTGCTTACTGCACTGCACAGTCAATTC
Ophiorrhiza pumila mRNA, clone: OPN037_B08, 3'end sequence, expressed in hairy root.
HX733811.1:228-247
AAGTGTTTTTCCAACAGCATTAGGAGTGAA228TCCAATGGTCACTGTTCAGGCCATTGCTTACTGCACTGCACAGTCAATTC
TSA: Petunia axillaris PETAX003638:Contig2 mRNA sequence.
JI334781.1:130-149
AAGTGTGTTTCCAACGGCGCTTGGTGTGAA130TCCAATGGTCACTGTTCAGGCTATTTTCTTATTGCACTGCACAAAATATA
TSA: Petunia axillaris PETAX003638:Contig3 mRNA sequence.
JI334782.1:362-381
AAGTGTGTTTCCAACGGCGCTTGGTGTGAA362TCCAATGGTCACTGTTCAGGCTATTTCTTATTGCACTGCACAAAATATAC
TSA: Cannabis sativa PK13327.1_1.CasaPuKu mRNA sequence.
JP460412.1:966-985
AAGTGTGTTTCCCACTGCTCTTGGAGTTAA966TCCAATGGTCACTGTTCAGGCACTTGCTTATTGCACAGCCCAATCAATTC
Medicago truncatula clone mth2-143f19, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC202569.13:119375-119394
AAGCGTATTTCCCACAGCTTTAGGTGTGAA119375TCCAATGGTCACTGTTCAGGCTATTGCATATTGCACAGCACAACATGTTC
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-06.
CP023118.1:26438801-26438820
AAGTGTATTCCCTACAGCTTTGGGTGTGAA26438801TCCAATGGTCACTGTTCAGGCCATTGCTTATTGCACTGCTCAATCTGTTC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:29684902-29684921
TAGTGTCTTTCCCACAGCTTTGGGTGTGAA29684902TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACAGCACAGGCTGTTG
Quercus dentata isolate Qdleaves-2020 chromosome 12.
CP116455.1:4029598-4029617
AAGTGTGTTTCCAACAGCTTTAGGTGTTAA4029598TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Quercus dentata isolate Qdleaves-2020 chromosome 12.
CP116455.1:4040329-4040348
AAGTGTGTTTCCAACAGCTTTAGGTGTTAA4040329TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:7680237-7680256
AAGTGTGTTTCCCACAGCTTTGGGTGTGAA7680237TCCAATGGTCACTGTTCAGGCTATTTCTTACTGCACAGCACAATATGTTC
Quercus variabilis isolate HB chromosome 12b.
CP129444.1:3111911-3111930
AAGTGTGTTTCCAACAGCTTTAGGTGTTAA3111911TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTTCTCAATCAGCTC
Quercus variabilis isolate HB chromosome 12b.
CP129444.1:3122211-3122230
TAGTGTGTTTCCAACAGCTTTAGGTGTTAA3122211TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Quercus variabilis isolate HB chromosome 12a.
CP129456.1:3142466-3142485
GAGTGTGTTTCCAACAGCTTTAGGTGTTAA3142466TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Quercus variabilis isolate HB chromosome 12a.
CP129456.1:3152914-3152933
TAGTGTGTTTCCAACAGCTTTAGGTGTTAA3152914TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:37955872-37955891
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA37955872TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:37050781-37050800
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA37050781TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:38372783-38372802
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA38372783TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:38007428-38007447
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA38007428TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTATTC
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:37843798-37843817
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA37843798TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus domestica genome assembly, chromosome: 16.
OU696692.1:38005086-38005105
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA38005086TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus domestica genome assembly, chromosome: 16.
OU744557.1:38128382-38128401
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA38128382TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Malus domestica genome assembly, chromosome: 16.
OU745006.1:38864478-38864497
AAGTGTTTTTCCAACGGCTTTAGGAGTGAA38864478TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACTGCCCAATCTGTTC
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:39647608-39647627
AAGTGTATTTCCCACAGCTTTAGGTGTGAA39647608TCCAATGGTCACTGTTCAGGCTATTGCATATTGCACAGCACAACATGTTC
Astragalus glycyphyllos genome assembly, chromosome: 2.
OY754308.1:38201127-38201146
AAGTGTTTTTCCCACAGCTTTGGGTGTGAA38201127TCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACAGCACAGCATGTCC
Quercus cerris genome assembly, chromosome: 12.
OY770017.1:3239667-3239686
AAGTGTGTTTCCAACAGCTTTAGGTGTTAA3239667TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Quercus cerris genome assembly, chromosome: 12.
OY770017.1:3250417-3250436
TAGTGTGTTTCCAACAGCTTTAGGTGTTAA3250417TCCAATGGTCACTGTTCAGGCTATTGCTTATTGCACTGCTCAATCAGCTC
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:149696596-149696615
AAGTGTGTTTCCCACGGCTTTGGGTGTGAA149696596TCCAATGGTCACTGTTCAGGCTATTGCATATTGCACAGCACAACATGTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/%20CCTGAACAGTGACCATTGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : %20CCTGAACAGTGACCATTGGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.397 | 0.389 | search_plus_done; http://172.18.8.135:50400/match?q=CCTGAACAGTGACCATTGGA&k=0&no_gap=0&offset=0&limit=50
1.182 | 0.784 | search_minus_done; http://172.18.8.135:50400/match?q=TCCAATGGTCACTGTTCAGG&k=0&no_gap=0&offset=0&limit=37
1.203 | 0.021 | cgi_end;

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